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Biostatistics with R : An Introduction to Statistics Through Biological Data
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ISBN: 9781461413028 146141301X 9781461413011 1461413028 Year: 2012 Publisher: New York NY Springer New York

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Biostatistics with R is designed around the dynamic interplay among statistical methods, their applications in biology, and their implementation.  The book explains basic statistical concepts with a simple yet rigorous language.  The development of ideas is in the context of real applied problems, for which step-by-step instructions for using R and R-Commander are provided.  Topics include data exploration, estimation, hypothesis testing, linear regression analysis, and clustering with two appendices on installing and using R and R-Commander.  A novel feature of this book is an elementary introduction to the basic of Bayesian analysis. This author discusses basic statistical analysis through a series of biological examples using R and R-Commander as computational tools.  The book is ideal for instructors of basic statistics for biologists and other health scientists.  The step-by-step application of statistical methods discussed in this book allows readers, who are interested in statistics and its application in biology, to use the book as a self-learning text. 


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Survival Analysis : A Self-Learning Text, Third Edition
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ISBN: 9781441966469 Year: 2012 Publisher: New York NY Springer New York

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This greatly expanded third edition of Survival Analysis- A Self-learning Text provides a highly readable description of state-of-the-art methods of analysis of survival/event-history data. This text is suitable for researchers and statisticians working in the medical and other life sciences as well as statisticians in academia who teach introductory and second-level courses on survival analysis. The third edition continues to use the unique "lecture-book" format of the first two editions with one new chapter, additional sections and clarifications to several chapters, and a revised computer appendix. The Computer Appendix, with step-by-step instructions for using the computer packages STATA, SAS, and SPSS, is expanded to include the software package R. David Kleinbaum is Professor of Epidemiology at the Rollins School of Public Health at Emory University, Atlanta, Georgia. Dr. Kleinbaum is internationally known for innovative textbooks and teaching on epidemiological methods, multiple linear regression, logistic regression, and survival analysis. He has provided extensive worldwide short-course training in over 150 short courses on statistical and epidemiological methods. He is also the author of ActivEpi (2002), an interactive computer-based instructional text on fundamentals of epidemiology, which has been used in a variety of educational environments including distance learning. Mitchel Klein is Research Assistant Professor with a joint appointment in the Department of Environmental and Occupational Health (EOH) and the Department of Epidemiology, also at the Rollins School of Public Health at Emory University. Dr. Klein is also co-author with Dr. Kleinbaum of the second edition of Logistic Regression- A Self-Learning Text (2002). He has regularly taught epidemiologic methods courses at Emory to graduate students in public health and in clinical medicine. He is responsible for the epidemiologic methods training of physicians enrolled in Emory's Master of Science in Clinical Research Program, and has collaborated with Dr. Kleinbaum both nationally and internationally in teaching several short courses on various topics in epidemiologic methods.


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Epidemiology : Key to Prevention
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ISBN: 9781461412052 Year: 2012 Publisher: New York NY Springer New York Imprint Springer

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This book is meant for adoption in first courses on epidemiology in Medical Schools and Faculties of Public Health in developing and transition countries and in workshops in these countries, taught for example by members of international organizations. It is also suitable for parallel or second reading within curricula in developed countries and for teaching epidemiology in a Master's programme on International Health . The book will enable any lecturer to compose his or her introductory courses on epidemiology by selecting the material deemed appropriate. It will provide a solid foundation for more advanced teaching. The intended readership consists in the first place of general medical students; students following the programme Preventive Physician  that runs parallel to general medical studies in some countries; students starting to specialize in Public Health; and lecturers in epidemiology. The book can also serve well as an introduction into epidemiology for anybody else interested in this field, for example staff of health institutions. Examples and practical work are taken from the present situation of health in Vietnam, which can easily be adapted to any other developing or transition country.


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Analysis of Genetic Association Studies
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ISBN: 9781461422457 Year: 2012 Publisher: Boston MA Springer US

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Analysis of Genetic Association Studies is both a graduate level textbook in statistical genetics and genetic epidemiology, and a reference book for the analysis of genetic association studies. Students, researchers, and professionals will find the topics introduced in Analysis of Genetic Association Studies particularly relevant.  The book is applicable to the study of statistics, biostatistics, genetics and genetic epidemiology.    In addition to providing derivations, the book uses real examples and simulations to illustrate step-by-step applications.  Introductory chapters on probability and genetic epidemiology terminology provide the reader with necessary background knowledge.  The organization of this work allows for both casual reference and close study. 


Book
Statistical Challenges in Modern Astronomy V
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ISBN: 9781461435204 Year: 2012 Publisher: New York NY Springer New York Imprint Springer

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Now beginning its third decade, the Statistical Challenges in Modern Astronomy (SCMA) conferences are the premier forums where astronomers and statisticians discuss advanced methodological issues arising in astronomical research.  From cosmology to exoplanets, astronomers produce enormous datasets and encounter difficult modeling issues to arrive at astrophysical insights.  At the SCMA V conference held at Penn State University in June 2011, researchers from around the world presented the latest astrostatistical methods.  To promote cross-disciplinary perspectives, each lecture from an expert in one field is followed by a commentary from the other field. A wide range of statistical developments are highlighted in the SCMA V conference.  Some focus on problems arising in precision cosmology involving characteristics of the cosmic microwave background, galaxy clustering and gravitational lensing.  Bayesian approaches are particularly important in this and other areas.  Knowledge discovery from megadatasets brings methods of data mining into use. Image analysis and time series analysis are areas where astronomers perennially wrestle with sophisticated modeling problems.  The proceedings ends with discussion of the future of astrostatistics.  Eric D. Feigelson, Professor of Astronomy & Astrophysics, and G. Jogesh Babu, Professor of Statistics, have long collaborated in cross-disciplinary research and services.  Under the auspices of Penn State's Center for Astrostatistics, they run the SCMA conferences, offer summer schools in statistics for astronomers, produce texts and research articles promoting advances in statistical methodology in astronomy.  Feigelson also conducts research in X-ray astronomy and star formation, and Babu is a mathematical statistician with interest in bootstrap methods, nonparametrics and asymptotic theory.


Book
Introduction to Data Mining for the Life Sciences
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ISBN: 9781597452908 Year: 2012 Publisher: Totowa NJ Humana Press

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One of the major challenges for the scientific community, a challenge that has been seen in many business disciplines, is the exponential increase in data being generated by new experimental techniques and research. A single microarray experiment, for example, can generate thousands of data points that need to be analyzed, and this problem is predicted to increase. As new techniques in areas such as genomics and proteomics continue to be adopted into the mainstream as the costs fall, the need for effective mechanisms for synthesizing these disparate forms of data together for analysis is of paramount importance. But the sheer volume of data means that traditional techniques need to be augmented by approaches that elicit knowledge from the data, using automated procedures. Data mining provides a set of such techniques, new techniques to integrate, synthesize, and analyze the data, uncovering the hidden patterns that exist within. Traditionally, techniques such as kernel learning methods, pattern recognition, and data mining, have been the domain of researchers in areas such as artificial intelligence, but leveraging these tools, techniques, and concepts against your data asset to identify problems early, understand interactions that exist and highlight previously unrealized relationships through the combination of these different disciplines can provide significant value for the investigator and her organization.


Book
A Concise Guide to Statistics
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ISBN: 9783642235023 Year: 2012 Publisher: Berlin Heidelberg Springer Berlin Heidelberg Imprint Springer

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The text gives a concise introduction into fundamental concepts in statistics. Chapter 1: Short exposition of probability theory, using generic examples. Chapter 2: Estimation in theory and practice, using biologically motivated examples. Maximum-likelihood estimation in covered, including Fisher information and power computations. Methods for calculating confidence intervals and robust alternatives to standard estimators are given. Chapter 3: Hypothesis testing with emphasis on concepts, particularly type-I , type-II errors, and interpreting test results. Several examples are provided. T-tests are used throughout, followed important other tests and robust/nonparametric alternatives. Multiple testing is discussed in more depth, and combination of independent tests is explained. Chapter 4: Linear regression, with computations solely based on R. Multiple group comparisons with ANOVA are covered together with linear contrasts, again using R for computations.


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Computational Systems Neurobiology
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ISBN: 9789400738584 Year: 2012 Publisher: Dordrecht Springer Netherlands Imprint Springer

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Computational neurosciences and systems biology are among the main domains of life science research where mathematical modeling made a difference. This book introduces the many different types of computational studies one can develop to study neuronal systems. It is aimed at undergraduate students starting their research in computational neurobiology or more senior researchers who would like, or need, to move towards computational approaches. Based on their specific project, the readers would then move to one of the more specialized excellent textbooks available in the field.   The first part of the book deals with molecular systems biology. Functional genomics is introduced through examples of transcriptomics and proteomics studies of neurobiological interest. Quantitative modelling of biochemical systems is presented in homogeneous compartments and using spatial descriptions. A second part deals with the various approaches to model single neuron physiology, and naturally moves to neuronal networks. A division is focused on the development of neurons and neuronal systems and the book closes on a series of methodological chapters. From the molecules to the organ, thinking at the level of systems is transforming biology and its impact on society. This book will help the reader to hop on the train directly in the tank engine.


Book
Principles and practice of clinical research
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ISBN: 9780123821676 0123821673 9780123821683 0123821681 9781283735186 1283735180 Year: 2012 Publisher: Amsterdam ; Boston : Elsevier/Academic Press,

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The third edition of this innovative work again provides a unique perspective on the clinical discovery process by providing input from experts within the NIH on the principles and practice of clinical research. Molecular medicine, genomics, and proteomics have opened vast opportunities for translation of basic science observations to the bedside through clinical research. As an introductory reference it gives clinical investigators in all fields an awareness of the tools required to ensure research protocols are well designed and comply with the rigorous regulatory requirements necessary to m


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Practical biostatistics
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ISBN: 9780124157941 0124157947 9780124158573 0124158579 Year: 2012 Publisher: Amsterdam Boston Elsevier/Academic Press

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Evidence-based medicine aims to apply the best available evidence gained from the scientific method to medical decision making. It is a practice that uses statistical analysis of scientific methods and outcomes to drive further experimentation and diagnosis. The profusion of evidence-based medicine in medical practice and clinical research has produced a need for life scientists and clinical researchers to assimilate biostatistics into their work to meet efficacy and practical standards. Practical Biostatistics provides researchers, medical professionals, and students with a friendly, practical guide to biostatistics. With a detailed outline of implementation steps complemented by a review of important topics, this book can be used as a quick reference or a hands-on guide to effectively incorporate biostatistics in clinical trials.

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